RB04_Meta

QC report

Assembly

Contig	Length	Graph
RB04_contig_1	15473 bp
RB04_contig_2	3023 bp
RB04_contig_3	114405 bp
RB04_contig_4	134537 bp
RB04_contig_5	234535 bp

Incompatibility Factors

Contig	Incompatibility factor(s)
RB04_contig_3	IncFIB(AP001918) - (97.51%) - AP001918 IncFIC(FII) - (93.23%) - AP001918
RB04_contig_4	IncY - (98.69%) - K02380
RB04_contig_5	IncA/C2 - (99.28%) - JN157804 IncX3 - (98.68%) - JN247852

Antibiotic Resistance Genes

Contig	Gene(s)
RB04_contig_3	aadA1 - (99.50%) - Aminoglycoside resistance aadA2 - (99.75%) - Aminoglycoside resistance cmlA1 - (99.52%) - Phenicol resistance floR - (97.53%) - Phenicol resistance sul2 - (99.14%) - Sulphonamide resistance tet(A) - (99.17%) - Tetracycline resistance tet(M) - (95.44%) - Tetracycline resistance dfrA12 - (99.20%) - Trimethoprim resistance
RB04_contig_5	aph(3')-Ia - (98.05%) - Aminoglycoside resistance aph(6)-Id - (96.21%) - aac(6')-Ib-cr - (98.17%) - Fluoroquinolone and aminoglycoside resistance blaNDM-1 - (99.14%) - Beta-lactam resistance blaCMY-2 - (96.17%) - Beta-lactam resistance blaOXA-1 - (98.33%) - Beta-lactam resistance blaDHA-1 - (97.81%) - Beta-lactam resistance mph(A) - (97.63%) - Macrolide resistance floR - (96.96%) - Phenicol resistance catB3 - (99.53%) - Phenicol resistance aac(6')-Ib-cr - (98.17%) - Fluoroquinolone and aminoglycoside resistance qnrB4 - (97.84%) - ARR-3 - (97.36%) - Rifampicin resistance sul1 - (98.51%) - Sulphonamide resistance sul2 - (92.78%) - Sulphonamide resistance sul1 - (98.73%) - Sulphonamide resistance tet(A) - (96.48%) - Tetracycline resistance

BLAST

Plasmids